STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03134.1Tetratricopeptide repeat protein. (441 aa)    
Predicted Functional Partners:
AKJ01594.1
MJ0042 family finger-like domain/tetratricopeptide repeat protein.
 
 
 0.824
AKJ01576.1
Adenylate cyclase.
 
 
 0.799
AKJ02757.1
TPR domain protein, putative component of TonB system.
 
   0.790
AKJ02405.1
TPR repeat protein.
 
 
   0.776
AKJ01603.1
TolA protein.
 
   0.772
AKJ04298.1
Tetratricopeptide repeat family.
 
   0.764
AKJ02837.1
TPR domain protein, putative component of TonB system.
 
   
 0.762
AKJ04918.1
TPR domain protein, putative component of TonB system.
 
     0.754
AKJ05797.1
TPR repeat protein.
 
     0.752
AKJ01984.1
TPR repeat protein.
 
     0.734
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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