STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03166.1Membrane protein. (521 aa)    
Predicted Functional Partners:
alc
Allantoicase; Belongs to the allantoicase family.
 
    0.911
AKJ03171.1
Ureidoglycolate hydrolase.
 
    0.901
AKJ03170.1
5-Hydroxyisourate Hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.894
AKJ01515.1
Xanthine dehydrogenase, molybdenum binding subunit.
 
     0.751
AKJ01514.1
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
     0.731
AKJ03168.1
Allantoinase.
 
     0.619
AKJ03165.1
Putative membrane protein.
       0.538
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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