STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03179.1Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family. (914 aa)    
Predicted Functional Partners:
AKJ03178.1
Metal-dependent hydrolase.
       0.661
AKJ04818.1
Alpha-L-arabinofuranosidase II precursor.
 
   
 0.598
AKJ05398.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
  
 0.569
AKJ01068.1
Choline-sulfatase.
 
 
 0.567
AKJ06131.1
Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.566
AKJ06121.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.564
AKJ00691.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.551
AKJ02873.1
Putative secreted protein.
  
     0.543
AKJ07647.1
Choline-sulfatase.
 
 
 0.541
AKJ03180.1
Hypothetical protein.
       0.535
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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