Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ03184.1Chitinase. (1636 aa)    
Predicted Functional Partners:
AKJ07109.1
Hypothetical protein.
  
     0.615
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
   
 0.592
AKJ03743.1
LysM domain protein.
  
     0.584
AKJ05733.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.579
AKJ07688.1
Hypothetical protein.
  
     0.546
AKJ02201.1
Hypothetical protein.
  
     0.519
AKI99216.1
Endonuclease/exonuclease/phosphatase family protein.
  
   
 0.503
AKJ02047.1
Aminopeptidase.
  
     0.499
AKJ01666.1
Hypothetical protein.
  
     0.495
AKJ07985.1
Glutamate synthase [NADPH] large chain.
  
     0.482
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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