STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03184.1Chitinase. (1636 aa)    
Predicted Functional Partners:
AKJ07109.1
Hypothetical protein.
  
     0.615
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
   
 0.608
AKJ03743.1
LysM domain protein.
  
     0.584
AKJ05733.1
Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides.
  
     0.579
AKJ07688.1
Hypothetical protein.
  
     0.546
AKI99216.1
Endonuclease/exonuclease/phosphatase family protein.
  
   
 0.523
AKJ02201.1
Hypothetical protein.
  
     0.519
AKJ02047.1
Aminopeptidase.
  
     0.499
AKJ07549.1
Hypothetical protein.
  
 
   0.497
AKJ01666.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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