STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03185.1Chemotaxis protein methyltransferase CheR. (727 aa)    
Predicted Functional Partners:
AKI99695.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.991
AKJ05961.1
Putative SigmaB asociated two-component system sensor protein.
 
 
0.991
AKJ07725.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.988
AKI99496.1
PAS/PAC domain protein.
 
0.986
AKJ00035.1
Hypothetical protein.
 
 
0.986
AKJ01622.1
Circadian input kinase A.
 
 
0.986
AKJ02082.1
Chemotaxis protein methyltransferase CheR.
 
 
0.984
AKI99519.1
Sensory box histidine kinase.
 
 
0.971
AKJ03002.1
Circadian input kinase A.
 
 
0.967
AKJ00612.1
Diguanylate cyclase/phosphodiesterase.
 
 
0.963
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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