Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ03192.1Peptidase S1 and S6, chymotrypsin/Hap. (265 aa)    
Predicted Functional Partners:
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.586
AKJ07821.1
Hypothetical protein.
    
 
 0.573
AKI98435.1
Serine peptidase.
 
 
 0.532
AKJ03191.1
Alanyl-tRNA synthetase family protein.
   
 
 0.504
AKJ00312.1
High-affnity carbon uptake protein Hat/HatR.
    
  0.489
AKJ02913.1
Protein serine/threonine phosphatase PrpC, regulation of stationary phase.
    
   0.488
AKJ04462.1
Ser/Thr and Tyr protein phosphatase.
    
 0.476
AKJ02934.1
Carboxypeptidase T precursor.
  
 
 
 0.475
rpsG
SSU ribosomal protein S7p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
    
   0.471
AKJ02650.1
Serine esterase, putative.
  
 
   0.458
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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