STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03192.1Peptidase S1 and S6, chymotrypsin/Hap. (265 aa)    
Predicted Functional Partners:
AKI98435.1
Serine peptidase.
 
 
 0.526
AKJ02934.1
Carboxypeptidase T precursor.
  
 
 0.517
AKJ03191.1
Alanyl-tRNA synthetase family protein.
   
   0.510
AKI98813.1
Hypothetical protein.
    
 0.479
AKJ03306.1
Hypothetical protein.
    
 0.479
AKJ05218.1
Hypothetical protein.
    
 0.479
AKJ02650.1
Serine esterase, putative.
  
 
   0.456
AKI99143.1
Hypothetical protein.
    
 0.441
AKJ00186.1
Alpha-2-macroglobulin domain protein.
    
 0.441
AKJ00187.1
Hypothetical protein.
    
 0.441
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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