Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03202.1cAMP-binding protein. (356 aa)    
Predicted Functional Partners:
AKJ04853.1
Adenylate cyclase.
  
 
 0.783
AKI99909.1
Adenylate cyclase.
  
 
 0.761
AKJ03801.1
Adenylate cyclase.
 
 
 0.753
AKJ00347.1
Adenylate cyclase.
 
 
 0.749
AKJ04151.1
Adenylate cyclase.
 
 
 0.749
AKJ05306.1
Adenylate cyclase.
 
 
 0.747
AKJ05920.1
Adenylate cyclase.
 
 
 0.744
AKJ07616.1
Adenylate cyclase.
 
 
 0.741
AKJ02105.1
Adenylate cyclase.
  
   0.740
AKJ03854.1
cAMP-binding protein.
  
     0.737
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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