STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03204.1Amino acid permease. (509 aa)    
Predicted Functional Partners:
AKJ03203.1
Hypothetical protein.
       0.572
asnS
Asparaginyl-tRNA synthetase.
       0.492
AKJ00982.1
Cytoplasmic alpha-amylase.
   
 0.481
AKJ02217.1
Cytoplasmic alpha-amylase.
   
 0.481
AKJ03268.1
Neopullulanase.
   
 0.481
AKJ03632.1
Trehalose synthase.
   
 0.481
glgE
Alpha-amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.481
AKJ07785.1
Trehalose synthase.
   
 0.481
AKJ07793.1
Periplasmic alpha-amylase.
   
 0.481
AKJ01668.1
Ethanolamine ammonia-lyase heavy chain.
  
  
 0.412
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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