STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03212.1TonB family protein. (930 aa)    
Predicted Functional Partners:
AKJ06010.1
Nicel/Cobalt-specific TonB-dependent outer membrane receptor.
 
 
 0.904
AKJ02790.1
TonB-dependent receptor.
 
 
 0.888
AKI99358.1
TonB-dependent receptor.
 
 
 0.863
AKJ05036.1
Adventurous gliding motility protein S.
 
 
 0.800
AKJ02786.1
Isochorismatase.
 
  
 0.787
AKJ07626.1
Tryptophan synthase alpha chain.
 
    0.764
AKJ07964.1
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
 
 0.758
AKJ04296.1
Putative abductin-like protein.
 
 
 0.755
AKJ05037.1
TolR-like protein.
 
 
 0.754
AKJ01134.1
Trehalose synthase.
 
 
 0.753
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.