STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03222.1Cell division protein FtsH. (299 aa)    
Predicted Functional Partners:
AKJ03221.1
Hypothetical protein.
       0.782
AKJ07199.1
HtrA protease/chaperone protein.
   
 0.758
AKJ03220.1
Hypothetical protein.
       0.699
AKJ00312.1
High-affnity carbon uptake protein Hat/HatR.
 
   0.605
AKJ07144.1
GTP cyclohydrolase II.
   
 
 0.604
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.502
AKJ07375.1
Chaperone protein DnaK.
    
 0.497
AKJ03223.1
Hypothetical protein.
       0.474
AKJ07926.1
Transport ATP-binding protein CydC.
 
 
 0.474
AKJ06586.1
Hypothetical protein.
  
 
  0.465
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.