Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03229.1Transcriptional regulator, TetR family. (244 aa)    
Predicted Functional Partners:
AKJ03230.1
Oxidoreductase.
 
     0.719
AKJ01645.1
Methionine ABC transporter ATP-binding protein.
  
     0.544
AKI98711.1
Spore photoproduct lyase.
  
     0.510
AKJ07441.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.476
vgb
Hypothetical protein; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.
  
     0.445
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.440
AKJ03516.1
Hypothetical protein.
  
   
 0.433
AKJ07515.1
Microbial collagenase, secreted.
  
     0.432
AKJ03604.1
Hypothetical protein.
  
     0.429
AKJ02550.1
Phage tail length tape-measure protein.
  
     0.409
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.