Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ03239.1Gliding motility protein MglA. (146 aa)    
Predicted Functional Partners:
AKJ01583.1
Gliding motility protein MglA.
 
 
 0.979
AKJ06647.1
Hypothetical protein.
 
 
 0.919
AKJ02569.1
Response regulator.
  
     0.731
AKJ01954.1
Hypothetical protein.
  
     0.705
ftsY
Signal recognition particle receptor protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
  
 0.667
AKJ06658.1
Hypothetical protein.
  
     0.663
AKJ04329.1
Hypothetical protein.
  
 
   0.631
AKJ04705.1
Hypothetical protein.
 
     0.618
AKJ06653.1
Type IV pilus biogenesis protein PilM.
  
   
 0.594
AKJ06613.1
Hypothetical protein.
  
     0.585
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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