Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ03257.1Adventurous gliding motility protein K. (1695 aa)    
Predicted Functional Partners:
AKJ01931.1
TPR domain protein, putative component of TonB system.
 
     0.785
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
 
 
   0.783
AKJ05153.1
Putative lipoprotein.
 
   0.780
AKJ05539.1
Putative lipoprotein.
 
   0.779
AKJ07626.1
Tryptophan synthase alpha chain.
 
 
   0.777
AKJ04709.1
Putative lipoprotein.
 
   0.775
AKJ07642.1
Hypothetical protein.
 
 
   0.775
AKI99700.1
Hypothetical protein.
 
 
   0.773
AKJ00779.1
Cell division protein FtsK.
 
     0.773
AKJ05049.1
OmpA domain protein.
 
 
 0.772
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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