Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00167.1 | AKJ03272.1 | AA314_01793 | AA314_04898 | Putative integral membrane transport protein. | Major facilitator superfamily MFS_1. | 0.414 |
AKJ03272.1 | AKJ00167.1 | AA314_04898 | AA314_01793 | Major facilitator superfamily MFS_1. | Putative integral membrane transport protein. | 0.414 |
AKJ03272.1 | AKJ03273.1 | AA314_04898 | AA314_04899 | Major facilitator superfamily MFS_1. | Hypothetical protein. | 0.561 |
AKJ03272.1 | hemH | AA314_04898 | AA314_03064 | Major facilitator superfamily MFS_1. | Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.654 |
AKJ03273.1 | AKJ03272.1 | AA314_04899 | AA314_04898 | Hypothetical protein. | Major facilitator superfamily MFS_1. | 0.561 |
hemH | AKJ03272.1 | AA314_03064 | AA314_04898 | Ferrochelatase, protoheme ferro-lyase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | Major facilitator superfamily MFS_1. | 0.654 |