STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03289.1Cell surface protein. (729 aa)    
Predicted Functional Partners:
AKJ03007.1
Hypothetical protein.
  
     0.702
AKJ08071.1
Secreted hydrolase.
  
     0.701
AKJ06067.1
Kazal-type serine protease inhibitor domain protein.
  
     0.686
AKJ03779.1
PvcA protein.
  
     0.675
AKJ07159.1
Hypothetical protein.
  
     0.647
AKJ03456.1
Hypothetical protein.
  
     0.639
AKJ03395.1
Shikimate kinase I.
  
     0.618
AKJ08098.1
Hypothetical protein.
  
     0.616
AKJ03458.1
Hypothetical protein.
  
     0.578
AKJ01472.1
Hypothetical protein.
  
     0.565
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.