STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03334.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
AKJ05695.1
Methylamine utilization protein mauG.
 
     0.792
AKJ03335.1
Hypothetical protein.
       0.592
AKJ08395.1
Methylamine utilization protein/Cytochrome c peroxidase.
 
     0.502
AKJ00412.1
Cytochrome c551 peroxidase.
 
     0.490
AKJ06332.1
TonB family protein.
  
     0.486
AKJ04280.1
Cytochrome c551 peroxidase.
 
     0.466
AKJ01762.1
Cytochrome c551 peroxidase.
 
     0.458
AKJ01766.1
Cytochrome c551 peroxidase.
 
     0.447
AKI99164.1
Transcriptional regulator, TetR family.
  
     0.438
AKJ06912.1
vtpJ-therm, putative.
  
     0.438
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.