STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03337.1Hyaluronan synthase. (423 aa)    
Predicted Functional Partners:
AKJ03024.1
Polysaccharide deacetylase.
 
  
 0.592
AKJ05992.1
Polysaccharide deacetylase.
 
  
 0.536
AKJ04756.1
Polysaccharide deacetylase, caspase activity.
  
  
 0.527
AKJ04451.1
Polysaccharide deacetylase domain protein.
  
  
 0.515
AKJ03257.1
Adventurous gliding motility protein K.
 
 
 0.512
AKJ01597.1
Polysaccharide deacetylase domain protein.
  
  
 0.487
AKJ00782.1
Hypothetical protein.
  
  
 0.469
AKJ03583.1
Endo-1,4-beta-xylanase A precursor.
  
  
 0.469
AKJ00035.1
Hypothetical protein.
 
  
 0.455
AKJ04216.1
Glycosyl transferase family 2.
 
 
 0.446
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.