STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03350.1Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (612 aa)    
Predicted Functional Partners:
AKJ03349.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.937
AKJ03348.1
Glycosyltransferase.
 
     0.826
AKJ03346.1
dTDP-4-dehydrorhamnose reductase; Belongs to the glycosyl hydrolase 1 family.
 
   
 0.816
AKJ06121.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.732
AKJ04818.1
Alpha-L-arabinofuranosidase II precursor.
   
 0.730
AKJ00691.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.726
AKJ06131.1
Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.722
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.717
AKJ06144.1
Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.693
AKJ03342.1
Glycosyltransferase.
  
     0.683
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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