STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03352.1RND efflux membrane fusion protein. (441 aa)    
Predicted Functional Partners:
AKJ03351.1
Outer membrane component of multidrug efflux pump.
 
 0.981
AKJ03353.1
HlyB/MsbA family ABC transporter.
 
 0.950
AKJ00292.1
Sulfate permease.
  
     0.677
AKJ00291.1
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.623
AKJ05384.1
Heavy metal RND efflux outer membrane protein, CzcC family.
 
 
 0.608
AKI99937.1
Heavy metal RND efflux outer membrane protein, CzcC family.
  
 
 0.540
AKJ00015.1
RND efflux system, outer membrane lipoprotein, NodT family.
  
 
 0.540
AKJ00163.1
Heavy metal RND efflux outer membrane protein, CzcC family.
  
 
 0.540
AKJ02052.1
Heavy metal RND efflux outer membrane protein, CzcC family.
  
 
 0.540
AKJ03035.1
Heavy metal RND efflux outer membrane protein, CzcC family.
  
 
 0.540
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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