STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03368.1Glycine amidinotransferase. (370 aa)    
Predicted Functional Partners:
speA
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine.
    
 0.921
AKJ03907.1
Sarcosine oxidase.
  
  
  0.913
AKJ04158.1
Sarcosine oxidase alpha subunit.
     
 0.911
AKJ04165.1
Low-specificity L-threonine aldolase.
    
  0.903
AKJ07463.1
Arginine N-succinyltransferase.
    
  0.903
AKI99950.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AKJ03773.1
Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AKJ06407.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.901
AKI99027.1
Aspartyl-tRNA(Asn) amidotransferase subunit A.
     
  0.900
AKI99331.1
Serine--glyoxylate aminotransferase.
     
  0.900
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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