STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03388.1Long-chain-fatty-acid--CoA ligase. (563 aa)    
Predicted Functional Partners:
AKJ06834.1
Long-chain-fatty-acid--CoA ligase.
 
 
 0.819
AKJ01428.1
Long-chain-fatty-acid CoA ligase.
 
  
0.799
AKJ05025.1
Sorbitol-6-phosphate 2-dehydrogenase.
    
 0.790
AKJ08038.1
Long-chain-fatty-acid--CoA ligase.
  
  
 
0.682
AKJ07424.1
Long-chain-fatty-acid--CoA ligase.
  
  
 
0.668
AKJ05092.1
Long-chain-fatty-acid--CoA ligase.
  
  
 
0.665
AKJ07925.1
Long-chain-fatty-acid--CoA ligase.
  
  
 
0.650
AKI98628.1
Lactonizing lipase precursor.
     
 0.610
AKJ00216.1
Lipase.
     
 0.610
AKJ00217.1
Hypothetical protein.
     
 0.610
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.