Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ02784.1 | AKJ02786.1 | AA314_04410 | AA314_04412 | Isochorismate synthase. | Isochorismatase. | 0.999 |
AKJ02784.1 | AKJ03394.1 | AA314_04410 | AA314_05020 | Isochorismate synthase. | Shikimate 5-dehydrogenase I alpha. | 0.828 |
AKJ02784.1 | AKJ03398.1 | AA314_04410 | AA314_05024 | Isochorismate synthase. | Menaquinone-specific isochorismate synthase. | 0.936 |
AKJ02784.1 | AKJ07124.1 | AA314_04410 | AA314_08750 | Isochorismate synthase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.721 |
AKJ02784.1 | AKJ07138.1 | AA314_04410 | AA314_08764 | Isochorismate synthase. | Anthranilate synthase, amidotransferase component. | 0.941 |
AKJ02784.1 | aroC | AA314_04410 | AA314_05019 | Isochorismate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.901 |
AKJ02784.1 | menA | AA314_04410 | AA314_05028 | Isochorismate synthase. | 1,4-dihydroxy-2-naphthoate polyprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.477 |
AKJ02784.1 | menD | AA314_04410 | AA314_05026 | Isochorismate synthase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.994 |
AKJ02784.1 | menH | AA314_04410 | AA314_05027 | Isochorismate synthase. | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). | 0.669 |
AKJ02784.1 | trpD | AA314_04410 | AA314_08749 | Isochorismate synthase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.654 |
AKJ02786.1 | AKJ02784.1 | AA314_04412 | AA314_04410 | Isochorismatase. | Isochorismate synthase. | 0.999 |
AKJ02786.1 | AKJ03398.1 | AA314_04412 | AA314_05024 | Isochorismatase. | Menaquinone-specific isochorismate synthase. | 0.983 |
AKJ03394.1 | AKJ02784.1 | AA314_05020 | AA314_04410 | Shikimate 5-dehydrogenase I alpha. | Isochorismate synthase. | 0.828 |
AKJ03394.1 | AKJ03398.1 | AA314_05020 | AA314_05024 | Shikimate 5-dehydrogenase I alpha. | Menaquinone-specific isochorismate synthase. | 0.903 |
AKJ03394.1 | AKJ07124.1 | AA314_05020 | AA314_08750 | Shikimate 5-dehydrogenase I alpha. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.462 |
AKJ03394.1 | AKJ07138.1 | AA314_05020 | AA314_08764 | Shikimate 5-dehydrogenase I alpha. | Anthranilate synthase, amidotransferase component. | 0.410 |
AKJ03394.1 | aroC | AA314_05020 | AA314_05019 | Shikimate 5-dehydrogenase I alpha. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.923 |
AKJ03394.1 | menD | AA314_05020 | AA314_05026 | Shikimate 5-dehydrogenase I alpha. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.519 |
AKJ03398.1 | AKJ02784.1 | AA314_05024 | AA314_04410 | Menaquinone-specific isochorismate synthase. | Isochorismate synthase. | 0.936 |
AKJ03398.1 | AKJ02786.1 | AA314_05024 | AA314_04412 | Menaquinone-specific isochorismate synthase. | Isochorismatase. | 0.983 |
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