STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03410.1Outer membrane protein A precursor. (209 aa)    
Predicted Functional Partners:
AKJ03411.1
Transcriptional regulator, DeoR family.
       0.671
AKJ08187.1
Flagellar motor rotation protein MotB.
  
 
 0.652
AKJ03412.1
Hypothetical protein.
       0.532
AKJ03409.1
Putative membrane protein.
       0.518
tolB
tolB protein precursor protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.474
AKJ02714.1
Lytic transglycosylase, catalytic.
  
     0.459
rpsF
SSU ribosomal protein S6p; Binds together with S18 to 16S ribosomal RNA.
 
   0.457
AKJ06767.1
Flagellar motor rotation protein MotB.
  
 
0.423
AKI99820.1
Flagellar motor rotation protein MotB.
  
 
0.419
AKJ05847.1
tolB protein precursor protein.
  
 
 0.415
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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