Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKJ03433.1Encapsulating protein for a DyP-type peroxidase or ferritin-like protein oligomers. (285 aa)    
Predicted Functional Partners:
AKJ03434.1
Hypothetical protein.
   
 
 0.971
AKJ02817.1
Ferritin-like di-iron-carboxylate protein.
 
 
 
 0.970
AKJ05865.1
Hypothetical protein.
    
   0.885
AKJ03432.1
Response regulator of zinc sigma-54-dependent two-component system.
     
 0.786
AKI99138.1
Putative dye-decolorizing peroxidase.
   
 
 0.694
AKJ08461.1
Peroxidase.
   
 
 0.694
AKJ03431.1
M23 peptidase domain protein.
     
 0.659
AKJ03430.1
Hypothetical protein.
     
 0.540
AKJ00470.1
Hypothetical protein.
  
     0.518
AKJ05098.1
Zinc-regulated TonB-dependent outer membrane receptor.
  
     0.482
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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