Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKJ03447.1Transcriptional regulator, AsnC family. (79 aa)    
Predicted Functional Partners:
AKJ03446.1
Putative LINOLEOYL-CoA DESATURASE.
       0.737
AKJ02171.1
Hypothetical protein.
  
     0.532
AKJ07071.1
Oxidoreductase FAD/NAD(P)-binding domain protein.
  
  
 0.477
AKJ03448.1
Sensor histidine kinase.
       0.470
AKJ07258.1
Glutamate synthase [NADPH] large chain.
     
 0.460
AKJ06174.1
Hypothetical protein.
  
     0.446
AKJ00457.1
Hypothetical protein.
  
     0.445
AKJ05645.1
Salicylate hydroxylase.
  
   
 0.429
AKJ04615.1
Transcriptional regulator, MarR family.
  
  
 0.422
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
     0.417
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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