STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03449.1Aha1 domain protein. (164 aa)    
Predicted Functional Partners:
AKJ03450.1
Transcriptional regulator, ArsR family.
 
    0.869
AKJ02121.1
Putative glutathionylspermidine synthase.
  
     0.767
AKJ02122.1
Hypothetical protein.
  
     0.765
AKJ07688.1
Hypothetical protein.
  
     0.751
AKJ07985.1
Glutamate synthase [NADPH] large chain.
  
     0.748
AKJ01511.1
Endonuclease/exonuclease/phosphatase family.
  
     0.739
AKJ01320.1
Hypothetical protein.
  
     0.738
AKI99216.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.714
AKJ08354.1
Hypothetical protein.
  
     0.684
AKI99978.1
Trans-aconitate 2-methyltransferase.
  
     0.628
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.