STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03456.1Hypothetical protein. (210 aa)    
Predicted Functional Partners:
AKJ03457.1
Hypothetical protein.
       0.664
AKJ03458.1
Hypothetical protein.
 
    
0.640
AKJ03289.1
Cell surface protein.
  
     0.639
AKJ01632.1
Peptidase, M36.
  
   0.560
AKJ00933.1
Choline dehydrogenase.
  
     0.522
AKJ00561.1
Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.465
AKJ07709.1
Putative periplasmic membrane protein.
  
     0.455
AKJ06067.1
Kazal-type serine protease inhibitor domain protein.
  
     0.447
AKJ02884.1
Hypothetical protein.
  
   0.439
AKJ03970.1
Cholesterol oxidase.
  
     0.424
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.