STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03509.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
AKJ03508.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.778
AKJ08018.1
Hypothetical protein.
  
     0.775
AKJ03507.1
Hypothetical protein.
       0.773
AKJ03510.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.727
AKJ03511.1
Hypothetical protein.
       0.684
AKI98968.1
Hypothetical protein.
  
     0.590
AKJ03506.1
Hypothetical protein.
       0.516
AKJ06159.1
Transcriptional regulator, TetR family.
  
     0.505
AKI99189.1
Integral membrane protein.
 
     0.424
AKJ01646.1
Acyl dehydratase.
  
     0.420
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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