Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKJ03540.1Hydroxymethylpyrimidine ABC transporter, substrate-binding component. (345 aa)    
Predicted Functional Partners:
AKJ03541.1
Hydroxymethylpyrimidine ABC transporter, transmembrane component.
 
 
 0.977
AKJ03542.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.952
AKI99618.1
ABC-type sulfate transporter, permease protein.
 
 
 0.790
AKI99619.1
ABC-type sulfate transporter, ATPase component.
  
 
 0.736
AKI99287.1
Hypothetical protein.
 
     0.551
AKJ02201.1
Hypothetical protein.
  
     0.545
AKJ02739.1
Alkanal monooxygenase alpha chain.
  
  
 0.539
AKJ00385.1
NHL repeat domain protein.
  
     0.538
AKJ02042.1
RTX toxin.
 
     0.537
AKI99817.1
Hypothetical protein.
 
     0.536
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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