STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03549.1ABC transporter, ATP-binding protein. (243 aa)    
Predicted Functional Partners:
AKJ03548.1
Transcriptional regulator, TetR family.
       0.804
AKJ03550.1
Hypothetical protein.
       0.804
AKJ03551.1
Hypothetical protein.
       0.804
AKJ03919.1
Gliding motility protein GldF.
 
 
 0.570
AKJ07363.1
Putative membrane spanning protein.
 
 0.538
AKJ02396.1
Gliding motility protein GldF.
 
 
 0.536
AKJ03547.1
Non-heme chloroperoxidase.
       0.520
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
 
 
 
 0.495
AKI98409.1
Membrane protein.
  
 
 0.474
AKI99972.1
Membrane protein.
  
 
 0.474
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (36%) [HD]