STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03564.1Putative secreted protein. (433 aa)    
Predicted Functional Partners:
AKJ01921.1
Hypothetical protein.
  
     0.770
AKI99831.1
PHP domain protein.
 
     0.733
AKJ00155.1
Squalene--hopene cyclase.
  
     0.729
AKJ02076.1
Putative immunogloblin.
  
     0.714
AKJ07865.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.714
AKJ03762.1
Hypothetical protein.
  
     0.710
AKJ00820.1
Transcriptional regulator, TetR family.
  
     0.694
AKI99725.1
Phosphoserine phosphatase.
  
     0.685
AKJ00837.1
Peptidase, M19 family.
  
     0.676
AKJ04633.1
Secreted oxidoreductase.
  
     0.676
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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