STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03569.1Phage tail fiber protein. (670 aa)    
Predicted Functional Partners:
AKJ07000.1
Phage tail fiber protein.
 
     0.744
AKJ05391.1
Internalin, putative.
  
     0.734
AKJ05900.1
Hypothetical protein.
  
     0.721
AKI99188.1
Acetyltransferase, GNAT family.
  
     0.702
AKJ02510.1
Oligo alginate lyase.
  
 
   0.673
AKI99277.1
Hypothetical protein.
  
     0.670
AKJ00230.1
Putative lipoprotein.
  
     0.662
AKJ07036.1
LYCV glycosyl hydrolase.
  
     0.627
AKJ08101.1
Hypothetical protein.
  
     0.600
AKJ03570.1
Microcystin dependent protein.
 
     0.596
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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