STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03571.1Hypothetical protein. (510 aa)    
Predicted Functional Partners:
AKJ03573.1
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
  
    0.573
AKJ05213.1
HEAT repeat protein.
 
     0.567
AKJ03572.1
Hypothetical protein.
       0.562
AKJ03574.1
Hypothetical protein; Belongs to the GbsR family.
       0.562
AKI99277.1
Hypothetical protein.
  
     0.532
AKJ04299.1
TPR domain protein, putative component of TonB system.
  
     0.523
AKJ05833.1
TPR domain protein.
  
     0.520
AKJ08101.1
Hypothetical protein.
  
     0.517
AKJ03257.1
Adventurous gliding motility protein K.
  
     0.514
AKJ03575.1
Hypothetical protein.
       0.514
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.