Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ00154.1 | AKJ03609.1 | AA314_01780 | AA314_05235 | Hypothetical protein. | Phosphoprotein phosphatase. | 0.604 |
AKJ00154.1 | AKJ03791.1 | AA314_01780 | AA314_05417 | Hypothetical protein. | High-affnity carbon uptake protein Hat/HatR. | 0.761 |
AKJ00154.1 | AKJ06446.1 | AA314_01780 | AA314_08072 | Hypothetical protein. | Endonuclease/exonuclease/phosphatase family. | 0.689 |
AKJ01137.1 | AKJ03609.1 | AA314_02763 | AA314_05235 | Transcription accessory protein. | Phosphoprotein phosphatase. | 0.940 |
AKJ01137.1 | AKJ05554.1 | AA314_02763 | AA314_07180 | Transcription accessory protein. | Hypothetical protein. | 0.864 |
AKJ01137.1 | rpoA | AA314_02763 | AA314_04757 | Transcription accessory protein. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.928 |
AKJ01137.1 | rpoB | AA314_02763 | AA314_06550 | Transcription accessory protein. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.893 |
AKJ01137.1 | rpoZ | AA314_02763 | AA314_03953 | Transcription accessory protein. | DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.882 |
AKJ03607.1 | AKJ03608.1 | AA314_05233 | AA314_05234 | Hypothetical protein. | Hypothetical protein. | 0.762 |
AKJ03607.1 | AKJ03609.1 | AA314_05233 | AA314_05235 | Hypothetical protein. | Phosphoprotein phosphatase. | 0.712 |
AKJ03608.1 | AKJ03607.1 | AA314_05234 | AA314_05233 | Hypothetical protein. | Hypothetical protein. | 0.762 |
AKJ03608.1 | AKJ03609.1 | AA314_05234 | AA314_05235 | Hypothetical protein. | Phosphoprotein phosphatase. | 0.723 |
AKJ03609.1 | AKJ00154.1 | AA314_05235 | AA314_01780 | Phosphoprotein phosphatase. | Hypothetical protein. | 0.604 |
AKJ03609.1 | AKJ01137.1 | AA314_05235 | AA314_02763 | Phosphoprotein phosphatase. | Transcription accessory protein. | 0.940 |
AKJ03609.1 | AKJ03607.1 | AA314_05235 | AA314_05233 | Phosphoprotein phosphatase. | Hypothetical protein. | 0.712 |
AKJ03609.1 | AKJ03608.1 | AA314_05235 | AA314_05234 | Phosphoprotein phosphatase. | Hypothetical protein. | 0.723 |
AKJ03609.1 | AKJ03791.1 | AA314_05235 | AA314_05417 | Phosphoprotein phosphatase. | High-affnity carbon uptake protein Hat/HatR. | 0.583 |
AKJ03609.1 | AKJ05554.1 | AA314_05235 | AA314_07180 | Phosphoprotein phosphatase. | Hypothetical protein. | 0.947 |
AKJ03609.1 | AKJ06446.1 | AA314_05235 | AA314_08072 | Phosphoprotein phosphatase. | Endonuclease/exonuclease/phosphatase family. | 0.612 |
AKJ03609.1 | rpoA | AA314_05235 | AA314_04757 | Phosphoprotein phosphatase. | DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.975 |
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