STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03612.1Diguanylate cyclase/phosphodiesterase. (298 aa)    
Predicted Functional Partners:
AKJ03614.1
Sensor histidine kinase.
 
 
   0.880
AKJ06476.1
Sensor histidine kinase.
 
 
   0.793
AKJ06792.1
Sensor histidine kinase.
 
 
   0.793
AKI99099.1
Sensor histidine kinase.
 
 
   0.791
AKJ02957.1
Sensor histidine kinase.
 
 
   0.791
AKJ04052.1
Chemotaxis protein methyltransferase CheR.
 
 
   0.791
AKJ04076.1
Sensor histidine kinase.
 
 
   0.788
AKJ06164.1
Sensor histidine kinase.
 
 
   0.788
AKJ00723.1
Sensor histidine kinase.
 
 
   0.787
AKJ05074.1
Sensor histidine kinase.
 
 
   0.787
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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