STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03738.1PAP2 family protein. (290 aa)    
Predicted Functional Partners:
AKJ03739.1
Aspartate aminotransferase.
       0.727
AKJ05539.1
Putative lipoprotein.
  
     0.674
AKJ03734.1
Hypothetical protein.
 
     0.662
AKJ04709.1
Putative lipoprotein.
  
     0.661
AKJ05153.1
Putative lipoprotein.
  
     0.634
AKJ05323.1
Polyhydroxyalkanoic acid synthase.
 
  
 0.624
AKI99865.1
F5/8 type C domain protein.
 
   
 0.608
AKJ03257.1
Adventurous gliding motility protein K.
 
   0.581
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.573
AKJ02806.1
Malonyl CoA-acyl carrier protein transacylase.
   
 0.573
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.