STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03765.1ABC-2 type transporter. (267 aa)    
Predicted Functional Partners:
AKJ03764.1
ABC transporter, ATPase subunit.
 
  
 0.965
AKJ03763.1
Hypothetical protein.
       0.752
AKJ05881.1
Hypothetical protein.
 
  
 0.562
AKI98888.1
Nitroreductase family protein.
  
  
 0.557
AKJ04966.1
Lanthionine biosynthesis protein LanB.
  
  
 0.557
AKJ03762.1
Hypothetical protein.
       0.547
AKJ03766.1
Sensory transduction histidine kinase.
 
    0.530
AKJ01935.1
ABC transporter, permease protein.
  
  
  0.515
AKJ00586.1
AknN.
  
  
 0.504
AKJ05787.1
Hypothetical protein.
  
  
 0.504
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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