Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98585.1 | AKJ03771.1 | AA314_00212 | AA314_05397 | Proline dehydrogenase. | Ornithine cyclodeaminase. | 0.920 |
AKI98585.1 | AKJ03773.1 | AA314_00212 | AA314_05399 | Proline dehydrogenase. | Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family. | 0.754 |
AKI98585.1 | AKJ04069.1 | AA314_00212 | AA314_05695 | Proline dehydrogenase. | WD-repeat protein. | 0.900 |
AKI98585.1 | AKJ04291.1 | AA314_00212 | AA314_05917 | Proline dehydrogenase. | Carbapenem antibiotics biosynthesis protein carD. | 0.900 |
AKI98585.1 | AKJ04675.1 | AA314_00212 | AA314_06301 | Proline dehydrogenase. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
AKI98585.1 | AKJ07430.1 | AA314_00212 | AA314_09056 | Proline dehydrogenase. | Proline iminopeptidase. | 0.900 |
AKI98585.1 | proC | AA314_00212 | AA314_06523 | Proline dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.928 |
AKJ01823.1 | AKJ03771.1 | AA314_03449 | AA314_05397 | Hypothetical protein. | Ornithine cyclodeaminase. | 0.499 |
AKJ01823.1 | AKJ04450.1 | AA314_03449 | AA314_06076 | Hypothetical protein. | Hypothetical protein. | 0.765 |
AKJ03771.1 | AKI98585.1 | AA314_05397 | AA314_00212 | Ornithine cyclodeaminase. | Proline dehydrogenase. | 0.920 |
AKJ03771.1 | AKJ01823.1 | AA314_05397 | AA314_03449 | Ornithine cyclodeaminase. | Hypothetical protein. | 0.499 |
AKJ03771.1 | AKJ03772.1 | AA314_05397 | AA314_05398 | Ornithine cyclodeaminase. | Sarcosine oxidase beta subunit. | 0.881 |
AKJ03771.1 | AKJ03773.1 | AA314_05397 | AA314_05399 | Ornithine cyclodeaminase. | Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family. | 0.746 |
AKJ03771.1 | AKJ04069.1 | AA314_05397 | AA314_05695 | Ornithine cyclodeaminase. | WD-repeat protein. | 0.900 |
AKJ03771.1 | AKJ04291.1 | AA314_05397 | AA314_05917 | Ornithine cyclodeaminase. | Carbapenem antibiotics biosynthesis protein carD. | 0.920 |
AKJ03771.1 | AKJ04450.1 | AA314_05397 | AA314_06076 | Ornithine cyclodeaminase. | Hypothetical protein. | 0.585 |
AKJ03771.1 | AKJ04675.1 | AA314_05397 | AA314_06301 | Ornithine cyclodeaminase. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
AKJ03771.1 | AKJ07430.1 | AA314_05397 | AA314_09056 | Ornithine cyclodeaminase. | Proline iminopeptidase. | 0.900 |
AKJ03771.1 | proC | AA314_05397 | AA314_06523 | Ornithine cyclodeaminase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.920 |
AKJ03772.1 | AKJ03771.1 | AA314_05398 | AA314_05397 | Sarcosine oxidase beta subunit. | Ornithine cyclodeaminase. | 0.881 |
page 1 of 3