STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03771.1Ornithine cyclodeaminase. (316 aa)    
Predicted Functional Partners:
AKI98585.1
Proline dehydrogenase.
  
 
 0.920
AKJ04291.1
Carbapenem antibiotics biosynthesis protein carD.
  
 
 0.920
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 
 0.920
AKJ04069.1
WD-repeat protein.
     
  0.900
AKJ04675.1
Proline iminopeptidase; Belongs to the peptidase S33 family.
     
  0.900
AKJ07430.1
Proline iminopeptidase.
     
  0.900
AKJ03772.1
Sarcosine oxidase beta subunit.
 
  
 0.881
AKJ03773.1
Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family.
  
  
 0.746
AKJ04450.1
Hypothetical protein.
  
    0.585
AKJ01823.1
Hypothetical protein.
  
     0.499
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (20%) [HD]