STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03779.1PvcA protein. (310 aa)    
Predicted Functional Partners:
AKJ01472.1
Hypothetical protein.
  
     0.727
AKJ05801.1
Hypothetical protein.
  
     0.704
AKJ03289.1
Cell surface protein.
  
     0.675
AKJ07159.1
Hypothetical protein.
  
     0.588
AKJ03780.1
Putative cytochrome P450 hydroxylase.
       0.545
AKJ03395.1
Shikimate kinase I.
  
     0.536
AKJ03007.1
Hypothetical protein.
  
     0.469
AKJ03777.1
Glutathione S-transferase.
       0.467
AKJ03778.1
Hypothetical protein.
       0.467
AKI98397.1
Hypothetical protein.
  
     0.450
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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