STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03813.1Type IV fimbrial assembly, ATPase PilB. (344 aa)    
Predicted Functional Partners:
AKJ06663.1
Type IV fimbrial assembly protein PilC.
 
 
 0.862
AKJ00954.1
General secretion pathway protein F.
 
 
 0.858
AKJ05719.1
General secretion pathway protein F.
 
 
 0.829
AKJ02669.1
Type IV fimbrial assembly, ATPase PilB.
  
     0.773
AKJ02851.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
     0.771
AKJ06656.1
Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.703
AKJ06653.1
Type IV pilus biogenesis protein PilM.
 
 
 
 0.693
AKJ06664.1
Twitching motility protein PilT.
 
  
 0.681
AKJ01723.1
Twitching motility protein PilT.
 
  
 0.669
AKJ06019.1
Type IV pilin PilA.
 
 
 0.667
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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