Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98952.1 | AKJ03844.1 | AA314_00579 | AA314_05470 | DNA/RNA helicase of DEAD/DEAH box family. | Mutator mutT protein. | 0.650 |
AKJ03842.1 | AKJ03843.1 | AA314_05468 | AA314_05469 | Putative lipoprotein. | Pyrrolo-quinoline quinone. | 0.770 |
AKJ03842.1 | AKJ03844.1 | AA314_05468 | AA314_05470 | Putative lipoprotein. | Mutator mutT protein. | 0.769 |
AKJ03842.1 | AKJ03845.1 | AA314_05468 | AA314_05471 | Putative lipoprotein. | Hypothetical protein. | 0.757 |
AKJ03842.1 | AKJ03846.1 | AA314_05468 | AA314_05472 | Putative lipoprotein. | Putative serine/threonine protein kinase. | 0.463 |
AKJ03842.1 | der | AA314_05468 | AA314_05467 | Putative lipoprotein. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.558 |
AKJ03842.1 | era | AA314_05468 | AA314_05466 | Putative lipoprotein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.546 |
AKJ03843.1 | AKJ03842.1 | AA314_05469 | AA314_05468 | Pyrrolo-quinoline quinone. | Putative lipoprotein. | 0.770 |
AKJ03843.1 | AKJ03844.1 | AA314_05469 | AA314_05470 | Pyrrolo-quinoline quinone. | Mutator mutT protein. | 0.792 |
AKJ03843.1 | AKJ03845.1 | AA314_05469 | AA314_05471 | Pyrrolo-quinoline quinone. | Hypothetical protein. | 0.781 |
AKJ03843.1 | AKJ03846.1 | AA314_05469 | AA314_05472 | Pyrrolo-quinoline quinone. | Putative serine/threonine protein kinase. | 0.472 |
AKJ03843.1 | der | AA314_05469 | AA314_05467 | Pyrrolo-quinoline quinone. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.659 |
AKJ03843.1 | era | AA314_05469 | AA314_05466 | Pyrrolo-quinoline quinone. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.544 |
AKJ03844.1 | AKI98952.1 | AA314_05470 | AA314_00579 | Mutator mutT protein. | DNA/RNA helicase of DEAD/DEAH box family. | 0.650 |
AKJ03844.1 | AKJ03842.1 | AA314_05470 | AA314_05468 | Mutator mutT protein. | Putative lipoprotein. | 0.769 |
AKJ03844.1 | AKJ03843.1 | AA314_05470 | AA314_05469 | Mutator mutT protein. | Pyrrolo-quinoline quinone. | 0.792 |
AKJ03844.1 | AKJ03845.1 | AA314_05470 | AA314_05471 | Mutator mutT protein. | Hypothetical protein. | 0.795 |
AKJ03844.1 | AKJ03846.1 | AA314_05470 | AA314_05472 | Mutator mutT protein. | Putative serine/threonine protein kinase. | 0.472 |
AKJ03844.1 | der | AA314_05470 | AA314_05467 | Mutator mutT protein. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.551 |
AKJ03844.1 | era | AA314_05470 | AA314_05466 | Mutator mutT protein. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.546 |
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