STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03848.1Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. (694 aa)    
Predicted Functional Partners:
AKJ05512.1
Peptidase M28.
  
  
 0.689
AKJ05956.1
Alanyl dipeptidyl peptidase.
  
     0.676
AKJ00349.1
Hypothetical protein.
  
     0.607
AKJ00603.1
Aminopeptidase.
  
  
 0.601
AKJ07090.1
Dipeptidyl peptidase IV.
  
     0.562
AKJ06300.1
Hypothetical protein.
  
     0.515
AKI99808.1
Hypothetical protein.
  
     0.513
AKJ07578.1
tolB protein precursor protein.
 
  
 0.503
AKJ03184.1
Chitinase.
  
     0.459
AKJ07689.1
Protease-associated PA domain protein.
  
  
 0.450
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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