Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99106.1 | AKJ00365.1 | AA314_00733 | AA314_01991 | Hypothetical protein. | Phosphodiesterase/alkaline phosphatase D. | 0.911 |
AKI99106.1 | AKJ03602.1 | AA314_00733 | AA314_05228 | Hypothetical protein. | Phosphodiesterase/alkaline phosphatase D-like protein. | 0.941 |
AKI99106.1 | AKJ03862.1 | AA314_00733 | AA314_05488 | Hypothetical protein. | 6-carboxytetrahydropterin synthase. | 0.900 |
AKI99106.1 | AKJ05095.1 | AA314_00733 | AA314_06721 | Hypothetical protein. | GTP cyclohydrolase I. | 0.914 |
AKI99106.1 | AKJ06167.1 | AA314_00733 | AA314_07793 | Hypothetical protein. | Hypothetical protein. | 0.913 |
AKJ00365.1 | AKI99106.1 | AA314_01991 | AA314_00733 | Phosphodiesterase/alkaline phosphatase D. | Hypothetical protein. | 0.911 |
AKJ00365.1 | AKJ03602.1 | AA314_01991 | AA314_05228 | Phosphodiesterase/alkaline phosphatase D. | Phosphodiesterase/alkaline phosphatase D-like protein. | 0.933 |
AKJ00365.1 | AKJ03862.1 | AA314_01991 | AA314_05488 | Phosphodiesterase/alkaline phosphatase D. | 6-carboxytetrahydropterin synthase. | 0.900 |
AKJ00365.1 | AKJ05095.1 | AA314_01991 | AA314_06721 | Phosphodiesterase/alkaline phosphatase D. | GTP cyclohydrolase I. | 0.914 |
AKJ00365.1 | AKJ06167.1 | AA314_01991 | AA314_07793 | Phosphodiesterase/alkaline phosphatase D. | Hypothetical protein. | 0.900 |
AKJ00627.1 | AKJ03862.1 | AA314_02253 | AA314_05488 | Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 6-carboxytetrahydropterin synthase. | 0.916 |
AKJ02429.1 | AKJ03862.1 | AA314_04055 | AA314_05488 | Ribonucleotide reductase of class III; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | 6-carboxytetrahydropterin synthase. | 0.819 |
AKJ02429.1 | AKJ05095.1 | AA314_04055 | AA314_06721 | Ribonucleotide reductase of class III; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | GTP cyclohydrolase I. | 0.552 |
AKJ02429.1 | queC | AA314_04055 | AA314_09005 | Ribonucleotide reductase of class III; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | Queuosine Biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. | 0.708 |
AKJ02429.1 | queF | AA314_04055 | AA314_08886 | Ribonucleotide reductase of class III; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. | NADPH dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. | 0.784 |
AKJ03602.1 | AKI99106.1 | AA314_05228 | AA314_00733 | Phosphodiesterase/alkaline phosphatase D-like protein. | Hypothetical protein. | 0.941 |
AKJ03602.1 | AKJ00365.1 | AA314_05228 | AA314_01991 | Phosphodiesterase/alkaline phosphatase D-like protein. | Phosphodiesterase/alkaline phosphatase D. | 0.933 |
AKJ03602.1 | AKJ03862.1 | AA314_05228 | AA314_05488 | Phosphodiesterase/alkaline phosphatase D-like protein. | 6-carboxytetrahydropterin synthase. | 0.900 |
AKJ03602.1 | AKJ05095.1 | AA314_05228 | AA314_06721 | Phosphodiesterase/alkaline phosphatase D-like protein. | GTP cyclohydrolase I. | 0.914 |
AKJ03602.1 | AKJ06167.1 | AA314_05228 | AA314_07793 | Phosphodiesterase/alkaline phosphatase D-like protein. | Hypothetical protein. | 0.924 |
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