STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03893.1Isoquinoline 1-oxidoreductase beta subunit. (765 aa)    
Predicted Functional Partners:
AKJ03892.1
Isoquinoline 1-oxidoreductase alpha subunit.
 
 0.992
AKJ00300.1
Isoquinoline 1-oxidoreductase alpha subunit.
 
 0.978
AKJ03691.1
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
 0.909
AKJ03891.1
Putative Isoquinoline 1-oxidoreductase.
 
    0.880
AKJ04978.1
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT.
 
 0.880
AKJ02115.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.712
AKJ02114.1
CTP:molybdopterin cytidylyltransferase.
 
   
 0.691
AKJ03689.1
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
  
 
 0.686
AKJ04979.1
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS.
  
 
 0.686
AKJ07372.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.629
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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