STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03919.1Gliding motility protein GldF. (213 aa)    
Predicted Functional Partners:
AKJ03918.1
Gliding motility protein GldG.
  
 0.995
AKJ03921.1
ABC-type multidrug transport system, ATPase component.
 
 
 0.934
AKJ02397.1
ATP-binding protein of ABC transporter.
 
 
 0.871
AKJ01445.1
ABC transporter, ATP-binding protein.
 
 
 0.870
AKJ07364.1
ABC transporter, ATP-binding protein.
 
 
 0.870
AKJ02395.1
Mucin 2 precursor.
 
  
 0.829
AKJ03917.1
Hypothetical protein.
 
     0.828
AKJ07362.1
Hypothetical protein.
 
  
 0.688
AKJ07499.1
ABC transporter, ATP-binding protein.
 
 
 0.654
AKJ03549.1
ABC transporter, ATP-binding protein.
 
 
 0.570
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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