STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ03927.1Cytoplasmic membrane protein. (1004 aa)    
Predicted Functional Partners:
AKJ03926.1
Hypothetical protein.
       0.752
AKJ01518.1
Phage lysin, 1,4-beta-N-acetylmuramidase.
  
     0.591
AKI99248.1
Endonuclease/exonuclease/phosphatase family protein.
  
     0.581
AKJ05293.1
Hypothetical protein.
  
     0.573
AKJ03791.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.565
AKJ05991.1
Hypothetical protein.
  
     0.563
AKJ02097.1
High-affnity carbon uptake protein Hat/HatR.
  
     0.562
AKJ06639.1
Heterocyst differentiation protein.
  
     0.561
AKI99073.1
Hypothetical protein.
 
    0.552
AKJ02884.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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