Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ01985.1 | AKJ04017.1 | AA314_03611 | AA314_05643 | Exodeoxyribonuclease III. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.535 |
AKJ04015.1 | AKJ04016.1 | AA314_05641 | AA314_05642 | PKA regulatory subunit-like protein. | Hypothetical protein. | 0.814 |
AKJ04015.1 | AKJ04017.1 | AA314_05641 | AA314_05643 | PKA regulatory subunit-like protein. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.578 |
AKJ04015.1 | AKJ04018.1 | AA314_05641 | AA314_05644 | PKA regulatory subunit-like protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.477 |
AKJ04015.1 | AKJ04019.1 | AA314_05641 | AA314_05645 | PKA regulatory subunit-like protein. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.477 |
AKJ04016.1 | AKJ04015.1 | AA314_05642 | AA314_05641 | Hypothetical protein. | PKA regulatory subunit-like protein. | 0.814 |
AKJ04016.1 | AKJ04017.1 | AA314_05642 | AA314_05643 | Hypothetical protein. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.578 |
AKJ04016.1 | AKJ04018.1 | AA314_05642 | AA314_05644 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.477 |
AKJ04016.1 | AKJ04019.1 | AA314_05642 | AA314_05645 | Hypothetical protein. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.477 |
AKJ04016.1 | AKJ07983.1 | AA314_05642 | AA314_09609 | Hypothetical protein. | Hypothetical protein. | 0.729 |
AKJ04017.1 | AKJ01985.1 | AA314_05643 | AA314_03611 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease III. | 0.535 |
AKJ04017.1 | AKJ04015.1 | AA314_05643 | AA314_05641 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | PKA regulatory subunit-like protein. | 0.578 |
AKJ04017.1 | AKJ04016.1 | AA314_05643 | AA314_05642 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.578 |
AKJ04017.1 | AKJ04018.1 | AA314_05643 | AA314_05644 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.878 |
AKJ04017.1 | AKJ04019.1 | AA314_05643 | AA314_05645 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.775 |
AKJ04017.1 | AKJ07983.1 | AA314_05643 | AA314_09609 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein. | 0.578 |
AKJ04017.1 | cmk | AA314_05643 | AA314_05976 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein EngA. | 0.780 |
AKJ04017.1 | der | AA314_05643 | AA314_05467 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.842 |
AKJ04017.1 | era | AA314_05643 | AA314_05466 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.634 |
AKJ04017.1 | ftsY | AA314_05643 | AA314_08198 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Signal recognition particle receptor protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. | 0.538 |
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