STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04059.1Hypothetical protein. (378 aa)    
Predicted Functional Partners:
AKJ04061.1
Mg-chelatase subunit ChlD.
 
  
 0.947
AKJ04060.1
Hypothetical protein.
 
   
 0.943
AKJ04056.1
Molybdate metabolism regulator.
     0.838
AKJ00068.1
Molybdate metabolism regulator.
 
  
 0.804
AKJ04062.1
Hypothetical protein.
       0.743
AKJ06105.1
RNA:NAD 2'-phosphotransferase.
  
     0.619
AKJ06761.1
Molybdate metabolism regulator.
 
     0.595
AKJ04058.1
Two-component sensor histidine kinase.
       0.588
AKJ03443.1
Inner membrane protein YqiK.
 
     0.534
AKI98473.1
Inner membrane protein YqiK.
 
     0.530
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.