STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04078.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
AKJ04076.1
Sensor histidine kinase.
       0.757
AKJ04075.1
Hypothetical protein.
       0.707
AKJ00072.1
Hypothetical protein.
  
 
0.673
AKJ02238.1
Hypothetical protein.
  
 
 0.673
AKJ04098.1
Hypothetical protein.
  
 
 0.673
AKJ06814.1
Hypothetical protein.
  
 
 0.673
AKJ02242.1
Hypothetical protein.
  
  
 0.538
AKJ04090.1
Hypothetical protein.
  
  
 0.538
AKJ06810.1
Putative transmembrane protein.
  
  
 0.538
AKJ02236.1
Putative cytoplasmic protein USSDB7A.
  
 
 0.517
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.