STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04090.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
AKJ02242.1
Hypothetical protein.
     
  0.900
AKJ06810.1
Putative transmembrane protein.
     
  0.900
AKJ04091.1
Protein ImpG/VasA.
  
  
 0.889
AKJ00072.1
Hypothetical protein.
  
  
 0.856
AKJ04088.1
Hypothetical protein.
  
 
 0.844
AKJ04095.1
Hypothetical protein.
  
  
 0.792
AKJ04092.1
Hypothetical protein.
       0.790
AKJ04094.1
Hypothetical protein.
  
  
 0.789
AKJ04087.1
Hypothetical protein.
       0.781
AKJ04089.1
Hypothetical protein.
       0.773
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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